NIMBioS Current Tutorials
NIMBioS will sponsor a tutorial April 6-8, 2014: Computing in the Cloud: What Every Computational Life Scientist Should Know. Application deadline is January 26, 2014. Click here for descriptive flyer.
NIMBioS will sponsor a tutorial May 19-21, 2014: Parameter Estimation for Dynamic Biological Models. Application deadline is January 31, 2014. Click here for descriptive flyer.
Algebraic and Discrete Biological Models for Undergraduate Courses
NIMBioS will sponsor a tutorial June 18-20, 2014: Algebraic and Discrete Biological Models for Undergraduate Courses. Information about this tutorial and how to apply will be available soon on this page.
NIMBioS Past Tutorials
NIMBioS sponsored a tutorial April 8-10, 2013: Mathematical Modeling for the Cell Biology Researcher and Educator designed to introduce and teach participants how to use computational resources for mathematical modeling and simulation of kinetic networks and networks in a spatial context.
Using Bioinformatics Data and Tools to Engage Students in Problem Solving: A Curriculum Development Workshop
NIMBioS and Scalable Computing and Leading Edge Innovate Technologies (SCALE-IT) co-sponsored a workshop/tutorial Jan 7-10, 2013: Using Bioinformatics Data and Tools to Engage Students in Problem Solving: A Curriculum Development Workshop. The tutorial was co-presented by BioQUEST Curriculum Consortium and European Bioinformatics Institute (EBI).
NIMBioS and Scalable Computing and Leading Edge Innovate Technologies (SCALE-IT) co-sponsored a Curriculum Development Faculty Workshop/Tutorial, January 12-14, 2012, at NIMBioS, designed to support participants in the development of problem-based interdisciplinary computational biology courses in a curriculum that integrates cyber-learning strategies and data intensive activities into the classroom.
NIMBioS hosted a tutorial on Multi-cell, Multi-scale Modeling, May 18-21, 2011, at NIMBioS. This tutorial introduced and taught a novel, state-of-the-art approach to multi-cell multi-scale modeling using the Glazier-Graner-Hogeweg (GGH) and reaction kinetics network models and the CompuCell3D (CC3D) and Systems Biology Markup Language (SBML) simulation environments.
NIMBioS hosted a tutorial on Migration from the Desktop: HPC application of R and other codes for biological research, May 9-11, 2011, at NIMBioS. The goal of this workshop was to introduce participants to the skills, strategies, and techniques necessary for them to make the jump from desktop computing to HPC environments.
NIMBioS hosted a tutorial on Stochastic Modeling in Biology, March 16-18, 2011, at NIMBioS. This tutorial was designed to introduce selected topics in stochastic modeling with an emphasis on biological applications.
NIMBioS hosted a tutorial on High Performance Computing for Phylogenetics, Oct. 13-15, 2010, at NIMBioS. This tutorial was designed to teach participants how to use TeraGrid, the CIPRES Portal, the iPlant Discovery environment, university clusters, and other typically free HPC resources for phylogenetic analysis.
NIMBioS hosted a tutorial on Graph Theory and Biological Networks August 16-18, 2010, at NIMBioS. This tutorial was designed to teach participants how graph theory can inform their understanding of many common biological patterns that are graphs.
NIMBioS hosted a tutorial on Computational Biology Curriculum Development July 6-9, 2010, at NIMBioS. This tutorial focused on strategies for including computational biology and cyber-learning in the development of interdisciplinary modules for teaching undergraduate biology.
NIMBioS hosted a tutorial on Optimal Control and Optimization for Biologists Dec. 15-17, 2009, at NIMBioS. The tutorial introduced selected topics in optimal control and optimization with an emphasis on biological applications and included lectures and interactive computer lab sessions.
NIMBioS hosted a tutorial on High-Performance Computing for Computational Science Professionals Collaborating with Biologists March 16-18, 2009.